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BaseInfo

ncRNA ID	osa-miR439i
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:15809251-15809375 [-]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	13 - UGUCGAACCGCGGUUGUUCGA - 33
Stem-loop(if miRNA)	-  A    C     G -A U        ---GG  C  G CUACAGUGACACUACAAUG GCAGGG AC UAUC AACGG C  G GUUCGAUA     GG GU G                   U |||||| || |||| ||||| |  | ||||||||     || || |                   U UGUCCC UG AUAG UUGUU G  C CAAGCUGU     AA UU U                   U       A  G    C     G CG -        ACACU  -  - AUUAAAAUUUUUAUCUUUU
Stem-loop sequence	GCAGGGACAUAUCCAACGGGCAGUGUUCGAUAGGGGCGUGGCUACAGUGACACUACAAUGUUUUUUUCUAUUUUUAAAAUUAUUUAAUCACAUGUCGAACCGCGGUUGUUCGAUAGGUACCCUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK070057.1	ncRNA:21   AGCUUGUUGGCGCCAAGCUGU   1   |||||||||||=||||||||| targets:1684   UCGAACAACCGUGGUUCGACA   1704 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023041K22, full insert sequence	NA	coding protein	psRNATarget
AK288371.1	ncRNA:21   AGCUUGUUGGCGCCAAGCUGU   1   ||||||||||||*|||||||| targets:351   UCGAACAACCGCAGUUCGACA   371 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026F03, full insert sequence	NA	coding protein	psRNATarget
AK288290.1	ncRNA:21   AGCUUGUUGGCGCCAAGCUGU   1   |=||||||||||*|||||||| targets:2067   UUGAACAACCGCAGUUCGACA   2087 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090019D06, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:15805478 "Cloning and characterization of microRNAs from rice"; Sunkar R, Girke T, Jain PK, Zhu JK; Plant Cell. 17:1397-1411(2005).