ncRNA ID | osa-miR5820 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:13982605-13982688 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 54 - UGGCAGAGAUUGAUCGAGGAA - 74 |
Stem-loop(if miRNA) |
      UGAACU   A    UA    ---        A  U   U GGAAAU      UAA UCCU  AUCG   UUUGCUAG UU UUC U ||||||      ||| ||||  ||||   |||||||| || ||| CCUUUA      GUU AGGA  UAGU   AGACGGUC AG GAG G       -----U   A    GC    UAG        C  U   U |
Stem-loop sequence | GGAAAUUGAACUUAAAUCCUUAAUCGUUUGCUAGAUUUUUCUUGUGAGUGACCUGGCAGAGAUUGAUCGAGGAAUUGUAUUUCC |
1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |