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BaseInfo

ncRNA ID osa-miR5792
Species Oryza sativa
Class miRNA
Genome position Chr10:11842884-11842960 [+]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 5 - GAUGACAGCGGUGGUUCGGACAUC - 28
Stem-loop(if miRNA)          C         UCGGA    UUC    UU  A
CGUCGAUGA AGCGGUGGU     CAUC   GGCU  GU C
||||||||| |||||||||     ||||   ||||  ||
GUAGCUAUU UUGCUACUA     GUAG   UCGG  CG C
         C         ---CG    --U    UU  U
Stem-loop sequence CGUCGAUGACAGCGGUGGUUCGGACAUCUUCGGCUUUGUACCUGCUUGGCUUGAUGGCAUCAUCGUUCUUAUCGAUG

Reference

1 PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage";
Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ;
Plant Cell. 23:4185-4207(2011).