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BaseInfo

ncRNA ID osa-miR1882e-3p
Species Oryza sativa
Class miRNA
Genome position Chr10:10320904-10321044 [-]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - GAAAUGAUCUUGGACGUAAUCUAG - 34
Stem-loop(if miRNA) --C   UA           U              UUU         -C         A  U     U   A
   CAA  UCCUAGAUUGC UUCAAGGUCAUUUC   AGGGAACCC  AUUCCCAUA AU CAGUA CCA A
   |||  ||||||||||| ||||||||||||||   |||||||||  ||||||||| || ||||| |||
   GUU  AGGAUCUAAUG AGGUUCUAGUAAAG   UCCCUUGGG  UAAGGGUAU UA GUCGU GGU G
GUC   UG           C              CAU         AA         C  U     U   C
Stem-loop sequence CCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGGAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGCUGGUUGCUGUAUCUAUGGGAAUAAGGGUUCCCUUACGAAAUGAUCUUGGACGUAAUCUAGGAGUUUGCUG

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).
2 PMID:19903869
"Rice MicroRNA effector complexes and targets";
Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y;
Plant Cell. 21:3421-3435(2009).