ncRNA ID | osa-miR1882e-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:10320904-10321044 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 108 - AGAUUGCUUUCAAGGUCAUUUCUU - 131 |
Stem-loop(if miRNA) |
--C   UA           U              UUU         -C         A  U     U   A    CAA  UCCUAGAUUGC UUCAAGGUCAUUUC   AGGGAACCC  AUUCCCAUA AU CAGUA CCA A    |||  ||||||||||| ||||||||||||||   |||||||||  ||||||||| || ||||| |||    GUU  AGGAUCUAAUG AGGUUCUAGUAAAG   UCCCUUGGG  UAAGGGUAU UA GUCGU GGU G GUC   UG           C              CAU         AA         C  U     U   C |
Stem-loop sequence | CCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGGAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGCUGGUUGCUGUAUCUAUGGGAAUAAGGGUUCCCUUACGAAAUGAUCUUGGACGUAAUCUAGGAGUUUGCUG |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |
2 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |