ncRNA ID | osa-miR1876 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:4833365-4833521 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 106 - AUAAGUGGGUUUGUGGGCUGGCCC - 129 |
Stem-loop(if miRNA) |
GGCA     GUUGG  UU    UG A       U    UG   UU                     C     G UA         CAUAU     UA  CUAU  G AUGCAAG GGGC  GCU  UGAACCCAUUUAUGGGCUAUU AAGUG G  AACCA     |||||     ||  ||||  | ||||||| ||||  |||  ||||||||||||||||||||| ||||| |  ||||U     GUAUG     AU  GAUA  C UAUGUUC CCCG  CGG  GUUUGGGUGAAUAUCCGGUAA UUCAC U  UUGGA -UUA     -----  UU    GU C       U    GU   GU                     A     G GG     |
Stem-loop sequence | GGCACAUAUGUUGGUAUUCUAUUGGAAUGCAAGUGGGCUGGCUUUUGAACCCAUUUAUGGGCUAUUCAAGUGGGUAAACCAUAGGUUGGUGCACUUAAAUGGCCUAUAAGUGGGUUUGUGGGCUGGCCCUCUUGUAUCCUGAUAGUUUAGUAUGAUU |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |