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BaseInfo

ncRNA ID osa-miR1428g-5p
Species Oryza sativa
Class miRNA
Genome position Chr10:3961370-3961478 [+]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 10 - AAUUCACAGGCCCUAUCUUGUG - 31
Stem-loop(if miRNA) -                  G CC      G     U AA  G    --   G   
 CGCUUUGCGAAUUCACAG C  UAUCUU UGGUA G  CU AGUA  CGC AUGA
 |||||||||||||||||| |  |||||| ||||| |  || ||||  ||| |||U
 GCGAAACGUUUAAGUGUC G  AUAGAA ACCAU C  GG UUAU  GCG UAUU
C                  - UA      A     U GG  G    AC   G   
Stem-loop sequence CGCUUUGCGAAUUCACAGGCCCUAUCUUGUGGUAUGAACUGAGUACGCGAUGAUUUAUGGCGCAUAUUGGGGGCUUACCAAAAGAUAAUGCUGUGAAUUUGCAAAGCGC

Reference

1 PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds";
Xue LJ, Zhang JJ, Xue HW;
Nucleic Acids Res. 37:916-930(2009).