ncRNA ID | osa-miR1428g-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:3961370-3961478 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 10 - AAUUCACAGGCCCUAUCUUGUG - 31 |
Stem-loop(if miRNA) |
-                  G CC      G     U AA  G    --   G     CGCUUUGCGAAUUCACAG C  UAUCUU UGGUA G  CU AGUA  CGC AUGA  |||||||||||||||||| |  |||||| ||||| |  || ||||  ||| |||U  GCGAAACGUUUAAGUGUC G  AUAGAA ACCAU C  GG UUAU  GCG UAUU C                  - UA      A     U GG  G    AC   G    |
Stem-loop sequence | CGCUUUGCGAAUUCACAGGCCCUAUCUUGUGGUAUGAACUGAGUACGCGAUGAUUUAUGGCGCAUAUUGGGGGCUUACCAAAAGAUAAUGCUGUGAAUUUGCAAAGCGC |
1 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |