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BaseInfo

ncRNA ID	osa-miR1846a-3p
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:529274-529385 [+]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	62 - UGACCCCGUUCUCCUCGCCGG - 82
Stem-loop(if miRNA)	-C  C   CUACCAAU    C         C  A        GC     C     G   CG UCC        GAGC GCCGGAUCU CC GUGAGGAG  CGGGG CGCUG A   || |||        |||| ||||||||| || ||||||||  ||||| |||||   GC AGG        CUCG CGGCCUAGG GG CGCUCCUC  GCCCC GUGGC U GA  A   AAAGAGAC    -         C  C        UU     A     C
Stem-loop sequence	CCGCUCCCUACCAAUGAGCCGCCGGAUCUCCCAGUGAGGAGGCCGGGGCCGCUGGAUCCGGUGACCCCGUUCUCCUCGCCGGCGGAUCCGGCGCUCCAGAGAAAGGAACGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015782267.1	ncRNA:21   GGCCGCUCCUCUUGCCCCAGU   1   =||||||*||||*|||||||| targets:333   UCGGCGACGAGACCGGGGUCA   353 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At4g28440 (LOC4338202), mRNA	uncharacterized protein At4g28440(LOC4338202)	coding protein	psRNATarget
AK073979.1	ncRNA:21   GGCCGCUCCUCUUGCCCCAGU   1   =||||||*||||*|||||||| targets:296   UCGGCGACGAGACCGGGGUCA   316 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033077H09, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008).
2	PMID:19103661 "Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009).