ncRNA ID | osa-miR5145 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:40622637-40622718 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 57 - ACCUGUUUGGAUUCUUGAGGGCUA - 80 |
Stem-loop(if miRNA) |
--CCA         A    UGA        UUAAAAUUAAAAU  G      CCUGUUUGG UUCU   GGGCUAAU             GU A      ||||||||| ||||   ||||||||             ||      GGACAAACC AAGA   CCUGAUUA             CG G CGCCG         -    -UA        --------CAAAU  A |
Stem-loop sequence | CCACCUGUUUGGAUUCUUGAGGGCUAAUUUAAAAUUAAAAUGUGAGAGCUAAACAUUAGUCCAUAGAACCAAACAGGGCCGC |
1 | PMID:21525786
"Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus"; Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D; RNA Biol. 8:538-547(2011). |