ncRNA ID | osa-miR1846d-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:39637065-39637180 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 87 - UAUCCGGCGCCGCAGGGAGG - 106 |
Stem-loop(if miRNA) |
U  -  -         AC  A  A       CU -  A     U     C   C    AG  GC CU GUCCCUCCC  CG GC GCCGGAU  C CC GUGAG AGGCC GGG CGCC  A  || || |||||||||  || || |||||||  | || ||||| ||||| ||| ||||  CG GA CAGGGAGGG  GC CG CGGCCUA  G GG CGCUC UCUGG CCC GUGG  U C  A  G         AC  -  -       -U U  C     C     C   A    CC |
Stem-loop sequence | UGCCUGUCCCUCCCACCGAGCAGCCGGAUCUCCCAGUGAGUAGGCCCGGGCCGCCAGAUCCGGUGACCCCGGUCUCCUCGCCGGUGUAUCCGGCGCCGCAGGGAGGGACGAGAGCC |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |