| ncRNA ID | osa-miR2090 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:38764289-38764391 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 76 - AACUCUGAUUCUAGAAUUUUUG - 97 |
| Stem-loop(if miRNA) |
AUUAUUAAC A C -AGG AGAACG UCUGAUUCU GAAUUUUUGCGUUAAAG G ACG A ||||||||| ||||||||||||||||| | ||| AGGCUAAGA CUUAAAAACGCAAUUUC C UGU A CCUAUUCCU C A AGAA CACAAA |
| Stem-loop sequence | AUUAUUAACUCUGAUUCUAGAAUUUUUGCGUUAAAGCGAGGACGAGAACGAAAAACACUGUAAGACACUUUAACGCAAAAAUUCCAGAAUCGGAUCCUUAUCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK288207.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090009D01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015756775.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group patatin-like protein 2 (LOC4347298), transcript variant X1, mRNA | patatin-like protein 2(LOC4347298) | coding protein | psRNATarget | |||||||||
| XM_015756776.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group patatin-like protein 2 (LOC4347298), transcript variant X2, mRNA | patatin-like protein 2(LOC4347298) | coding protein | psRNATarget |
| 1 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |