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BaseInfo

ncRNA ID osa-miR2870
Species Oryza sativa
Class miRNA
Genome position Chr1:27181872-27182032 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 10 - UAAUCAGUUUGGGGAGACAAA - 30
Stem-loop(if miRNA) CUU   C                     A      C          CU  UUACA   G  U ACCACUAACUUCUGAGUUCUG
   GUA UUCAGUUUGUCUCUCCAAACU AUUAGU CAAUGAACUU  GA     AAU AG A                     A
   ||| ||||||||||||||||||||| |||||| ||||||||||  ||     ||| || |
   CGU AAGUCAAACAGAGGGGUUUGA UAAUCA GUUACUUGAA  CU     UCU UU A                     U
---   A                     C      C          AC  ----U   -  - ACGUUAUCAAUAUAGAGGUAU
Stem-loop sequence CUUGUACUUCAGUUUGUCUCUCCAAACUAAUUAGUCCAAUGAACUUCUGAUUACAAAUGAGUAACCACUAACUUCUGAGUUCUGAUUAUGGAGAUAUAACUAUUGCAAUUUCUUUCCAAAGUUCAUUGCACUAAUCAGUUUGGGGAGACAAACUGAAAUGC

Reference

1 PMID:19903869
"Rice MicroRNA effector complexes and targets";
Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y;
Plant Cell. 21:3421-3435(2009).