ncRNA ID | osa-miR5815 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:25017304-25017415 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 80 - AAUGUUAUGGACACUAGAUGACAU - 103 |
Stem-loop(if miRNA) |
-AAUGUAUUAAA    AUG               AGG      GAUGG    A    UU             UGUU   GACACUAGAUGACAU   GUUGAU     UCUA UAUG  G             ||||   |||||||||||||||   ||||||     |||| ||||             ACAA   CUGUGGUUUACUGUG   UAAUUA     AGAU GUAU  U UUAACUUUGAAA    -AA               ---      ---AA    A    UC |
Stem-loop sequence | AAUGUAUUAAAUGUUAUGGACACUAGAUGACAUAGGGUUGAUGAUGGUCUAAUAUGUUGUCUUAUGAUAGAAAAUUAAUGUGUCAUUUGGUGUCAAAACAAAAGUUUCAAUU |
1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |