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BaseInfo

ncRNA ID	osa-miR5146
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:22418294-22418377 [+]
Reference genome	MSU7
Source	miRBase
Length	24
Mature sequence(if miRNA)	51 - UUUAACUAAUGAACCGGCACCUAU - 74
Stem-loop(if miRNA)	---------               -   -AA       A   CUAU          UAUAGGUGCUGGUUC UUA   AAAACCG UAC    A          ||||||||||||||| |||   ||||||| |||    G          AUAUCCACGGCCAAG AAU   UUUUGGC AUG    U AAAUGCUUC               U   CAA       C   UUUA
Stem-loop sequence	UAUAGGUGCUGGUUCUUAAAAAAACCGAUACCUAUAGUAUUUGUACCGGUUUUAACUAAUGAACCGGCACCUAUACUUCGUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288262.1	ncRNA:24   UAUCCACGGCCAAGUAAUCAAUUU   1   |||||||||||||=|||||||||| targets:250   AUAGGUGCCGGUUUAUUAGUUAAA   273 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090016B02, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:21525786 "Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus"; Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D; RNA Biol. 8:538-547(2011).