ncRNA ID | osa-miR1847.2 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:20332878-20332987 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 60 - UGGCCCACAUGUUAGUGCCACAAC - 83 |
Stem-loop(if miRNA) |
CU A C A C AGA CCCU ACUUUGUG AGUUUGCAGUUGUGGCACUGACAU UGGGCCAGA A ||| |||| |||||||| |||||||||||||||||||||||| ||||||||| UCU GGGA UGAAAUAC UCAAACGUCAACACCGUGAUUGUA ACCCGGUUU C AG C A C A |
Stem-loop sequence | AGACUCCCUAACUUUGUGCAGUUUGCAGUUGUGGCACUGACAUAUGGGCCAGACACAUUUGGCCCACAUGUUAGUGCCACAACUGCAAACUACAUAAAGUCAGGGGAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK106328.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-101-F04, full insert sequence | NA | coding protein | psRNATarget |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |