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BaseInfo

ncRNA ID osa-miR1861a
Species Oryza sativa
Class miRNA
Genome position Chr1:15049772-15049900 [+]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 23 - UGAUCUUGAGGCAGAAACUGAG - 44
Stem-loop(if miRNA) -UUGUG   C      U     C        A     A     A  A  U       UC  UCU
      UUG AUAUUC UAGGC UGAUCUUG GGCAG AACUG GU GU GGUGAAC  GC   A
      ||| |||||| ||||| |||||||| ||||| ||||| || || |||||||  ||
      AAC UAUAAG AUCUG GCUAGAAC CUGUC UUGGC CA CG UCACUUG  UG   U
AGUGUA   A      U     A        C     C     A  G  C       CU  UUG
Stem-loop sequence UUGUGUUGCAUAUUCUUAGGCCUGAUCUUGAGGCAGAAACUGAGUAGUUGGUGAACUCGCUCUAUGUUGUUCGUUCACUCGCGACACGGUUCCUGUCCCAAGAUCGAGUCUAUGAAUAUACAAAUGUGA

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).