ncRNA ID | osa-miR2097-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:9055603-9055779 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 8 - AGAGAUGGGACGGGCAGGGAAG - 29 |
Stem-loop(if miRNA) |
-GUGGG         G    G C     AG    UAGA  GAUAGAG       A   G ---G   -AG GG U G  UU    G     CG       GAAGAGAUG GACG G AGGGA  GAAG    UG       UUUGGGG UAG A    GGA   G  A A AU  GGUU UUUUU  G       ||||||||| |||| | |||||  ||||    ||       ||||||| ||| |    |||   |  | | ||  |||| |||||       UUUCUUUAC CUGU C UUCUU  CUUU    AC       GAAUCCC GUC U    UUU   C  U U UG  CCAA AAAAA  A CGAAAA         G    G -     CU    UAAG  -----GA       C   G GACA   GUA UU U G  UU    A     AA |
Stem-loop sequence | GUGGGGAAGAGAUGGGACGGGCAGGGAAGGAAGUAGAUGGAUAGAGUUUGGGGAUAGGAGGGAAGGGGAUAGAUUUGGUUGUUUUUCGGAAAAAAAAAAACCUUGUGUUUUUCAUGUUUACAGUGCUGCCCCUAAGAGCAGAAUUUUCUCUUCUUCGUGUCGCAUUUCUUUAAAAGC |
1 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |