| ncRNA ID | osa-miR5143a |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:8417107-8417315 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 13 - UGUGGUAUGUUGGCAAUGUAGGAA - 36 |
| Stem-loop(if miRNA) |
----CC U - A A C A G UG C C CACUAUCAAGACACUUCUCCCA AUUU UGUUGAGCAUCAGGACAU UCA ACUUCCU CAUUG CCAAUAUACCACA AA ACU CAAU U G CU UUUAC GUCC UGUC U ||| ||||||| ||||| ||||||||||||| || ||| |||| | | || ||||| |||| |||| A AGU UGAAGGA GUAAC GGUUGUAUGGUGU UU UGA GUUG G C GA AAAUG UACA UCUC A AUGCUA C U - A U C G GU U C --------------UCUCCUAC ---- GUUCCGUGAGGUGUGAAU |
| Stem-loop sequence | CCUCAUACUUCCUCAUUGACCAAUAUACCACAAAACACUACAAUGUUGGCCUCUUUACCACUAUCAAGACACUUCUCCCAGUCCAUUUUGUCUGUUGAGCAUCAGGACAUUAAUAAGUGUGGAGUGCCUUGCUCUACAUCAUCCUCUGUAAACAGUCUGGGGUUGCAGUUUUAUGUGGUAUGUUGGCAAUGUAGGAAGUCUGAAUCGUA |
| 1 | PMID:21525786
"Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus"; Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D; RNA Biol. 8:538-547(2011). |
| 2 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |