ncRNA ID | osa-miR1426 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:7189218-7189347 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 106 - AGAAUCUUGAUGAUGAUUAAA - 126 |
Stem-loop(if miRNA) |
AAAUA   UC    UG       AA  GA   -ACGAUA   AGGCCGUGAAGCAAAUAUGUAAG      GAA  UUGA  AUGAUUA  AG  GGG       GGC                       A      |||  ||||  |||||||  ||  |||       |||      CUU  AGCU  UACUAAU  UU  CCC       AAG                       C -AAAA   UU    UA       AG  AC   AAAAAAA   UGAAAGAUCUUAAGGGCCGUUGG |
Stem-loop sequence | AAAUAGAAUCUUGAUGAUGAUUAAAAGGAGGGACGAUAGGCAGGCCGUGAAGCAAAUAUGUAAGACGGUUGCCGGGAAUUCUAGAAAGUGAAAAAAAAACCCCAUUGAUAAUCAUAUUCGAUUUUCAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK119459.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:001-133-E07, full insert sequence | NA | coding protein | psRNATarget |
1 | PMID:18353984
"Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)"; Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ; Proc Natl Acad Sci U S A. 105:4951-4956(2008). |