ncRNA ID | novel_vvi_miR946 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr7:17083979-17084175 [-] |
Reference genome | 12X |
Source | SRR1528363 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUACUGUGAACUUAACUAUGGUUA - 24 |
Stem-loop(if miRNA) |
--                -     --A     UG   G          UA     A    CU UG     --      C      U          -   GAAA   ACUAUGGUUAAGUUCA AGUGA   AUUUC  ACU UGAACUUAAC  UGGUU AGUU  U  UUAAU  GGAACU AACUAC GUUAAGUUCA AGU    U   |||||||||||||||| |||||   |||||  ||| ||||||||||  ||||| ||||  |  |||||  |||||| |||||| |||||||||| |||   UGGUAUCAAUUCAAGU UCAUU   UAAAG  UGG ACUUGAAUUG  AUCAA UCAA  A  AAUUG  UCUUGA UUGGUG CAAUUCAAGU UCA    U AU                G     CUA     --   -          UC     C    -- GU     UU      A      U          A   AGCU |
Stem-loop sequence | ACUAUGGUUAAGUUCAAGUGAAAUUUCUGACUGUGAACUUAACUAUGGUUAAGUUCUUUGUUAAUGGAACUCAACUACUGUUAAGUUCAAGUGAAAUUUCGAACUAUGAACUUAACUGUGGUUAAGUUCUUUGUUAAUGAAACUCAACUACUGUUAAGUUCAGGUGAAAUAUCUUACUGUGAACUUAACUAUGGUUA |