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BaseInfo

ncRNA ID	novel_vvi_miR934
Species	Vitis vinifera
Class	miRNA
Genome position	Chr19:4159327-4159510 [-]
Reference genome	12X
Source	SRR1528363
Length	24
Mature sequence(if miRNA)	161 - ACAGUGAUUUUAGGAAGUGUUUCU - 184
Stem-loop(if miRNA)	--AC               UG   C   C        CU   AAU     -A   C  U   A           C    -AA     UU  AA     AGUGAUUUUAGGAAG  UUU UAA AUUUUUAA  CUU   AAUUU  UAU AU CAA UGUUAAAAAUA UAGA   CGUUU  UA  A     |||||||||||||||  ||| ||| ||||||||  |||   |||||  ||| || ||| ||||||||||| ||||   |||||  ||  U     UCACUGAAAUCUUUU  AAA AUU UAAAAAUU  GAA   UUAAA  AUA UA GUU ACAAUUUUUAU AUCU   GCAAA  AU  C ACUA               GU   A   A        AU   -AU     AA   A  U   C           A    CAC     UC  CA
Stem-loop sequence	ACAGUGAUUUUAGGAAGUGUUUCUAACAUUUUUAACUCUUAAUAAUUUAUAUCAUUCAAAUGUUAAAAAUACUAGAAACGUUUUUUAAAAUCACUACUAAACGCACUCUAAUAUUUUUAACACUUGUAUAAUAAAAAAUUUAAAGUAUUAAAAAUAUUAAAAAUGUUUUCUAAAGUCACUAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA154839.1	ncRNA:24   UCUUUGUGAAGGAUUUUAGUGACA   1   ||||||||||||||||||||=||| targets:2680   AGAAACACUUCCUAAAAUCAUUGU   2703 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_4953_Transcript_6/7_Confidence_0.478.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA146990.1	ncRNA:24   UCUUUGUGAAGGAUUUUAGUGACA   1   |*||||||||||||||||||||*| targets:3464   AAAAACACUUCCUAAAAUCACUAU   3487 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_5272_Transcript_7/11_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA159796.1	ncRNA:24   UCUUUGUGAAGGAUUUUAGUGACA   1   ||||||||||||||=||||||||* targets:2665   AGAAACACUUCCUAGAAUCACUGC   2688 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_3174_Transcript_7/8_Confidence_0.565.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA141295.1	ncRNA:24   UCUUUGUGAAGGAUUUUAGUGACA   1   |||||=||||||||||||||||*| targets:665   AGAAAUACUUCCUAAAAUCACUAU   688 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_7662_Transcript_5/10_Confidence_0.136.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA148189.1	ncRNA:24   UCUUUGUGAAGGAUUUUAGUGACA   1   ||||||||||||||*||||||||* targets:651   AGAAACACUUCCUAUAAUCACUGC   674 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_14406_Transcript_5/5_Confidence_0.583.Vivi mRNA sequence	NA	coding protein	psRNATarget