ncRNA ID | novel_vvi_miR929 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:5798947-5799026 [+] |
Reference genome | 12X |
Source | SRR1528363;SRR1528371;SRR1528374;SRR1528380;SRR1528381;SRR1528383;SRR1528391;SRR1528392;SRR1528404;SRR1528405;SRR1528408;SRR1528417 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUAGAGGAGAGUGGAUGUAGGCC - 24 |
Stem-loop(if miRNA) |
---GU   A      U          ---C     GCGCCGA      UAG GGAGAG GGAUGUAGGC    GGGUU       A      ||| |||||| ||||||||||    |||||      AUC CUUCUC CUUACGUUUG    CUCAA       C UUCUC   C      U          UAUU     AUAUCAC |
Stem-loop sequence | GUUAGAGGAGAGUGGAUGUAGGCCGGGUUGCGCCGAACCACUAUAAACUCUUAUGUUUGCAUUCUCUCUUCCCUACUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA157323.1 |
|
1.5 | TSA: Vitis vinifera Locus_23973_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |