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BaseInfo

ncRNA ID novel_vvi_miR925
Species Vitis vinifera
Class miRNA
Genome position Chr16:5408603-5408660 [-]
Reference genome 12X
Source SRR1528363;SRR1528407;SRR1528416
Length 24
Mature sequence(if miRNA) 1 - UGCAUUUGGAUCUAAAAUUUUGUA - 24
Stem-loop(if miRNA) --G          C         U    U
   AAAAUUUUAG UCCAAAUGC AUUG G
   |||||||||| ||||||||| ||||
   UUUUAAAAUC AGGUUUACG UAAC U
AUG          U         U    U
Stem-loop sequence GAAAAUUUUAGCUCCAAAUGCUAUUGUGUUCAAUUGCAUUUGGAUCUAAAAUUUUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA148188.1
ncRNA:24   AUGUUUUAAAAUCUAGGUUUACGU   1
  ||||||||||||||||||||||||
targets:625   UACAAAAUUUUAGAUCCAAAUGCA   648

0.0 TSA: Vitis vinifera Locus_2263_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget