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BaseInfo

ncRNA ID osa-miR156b-3p
Species Oryza sativa
Class miRNA
Genome position Chr1:4666341-4666516 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 110 - GCUCACUCUCUAUCUGUCAGC - 130
Stem-loop(if miRNA) U    --          A   --    UCUA     UU   ----A  U        -             A      GCUU          - A
 UGUC  UUGAGAGGGG AGA  GAUC    UGGGU  UGG     GG CUGACAGA AGAGAGUGAGCAC CACGGU    UCUUAGCAUG C A
 ||||  |||||||||| |||  ||||    |||||  |||     || |||||||| ||||||||||||| ||||||    |||||||||| |
 ACAG  GACUCUCUUC UCU  UUAG    ACCCG  ACC     CC GACUGUCU UCUCUCACUCGUG GUGUCG    AGGGUCGUAC G G
G    UU          C   AA    UAUA     -U   ACUUG  -        A             C      ----          C A
Stem-loop sequence UUGUCUUGAGAGGGGAAGAGAUCUCUAUGGGUUUUGGAGGUCUGACAGAAGAGAGUGAGCACACACGGUGCUUUCUUAGCAUGCAAGAGCCAUGCUGGGAGCUGUGCGUGCUCACUCUCUAUCUGUCAGCCGUUCACCAUGCCCAAUAUGAUUAAUCUCCUUCUCUCAGUUGACAG

Reference

1 PMID:12101121
"MicroRNAs in plants";
Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP;
Genes Dev. 16:1616-1626(2002).
2 PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors";
Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y;
PLoS Pathog. 7:e1002176(2011).