ncRNA ID | osa-miR156b-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:4666341-4666516 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 110 - GCUCACUCUCUAUCUGUCAGC - 130 |
Stem-loop(if miRNA) |
U    --          A   --    UCUA     UU   ----A  U        -             A      GCUU          - A  UGUC  UUGAGAGGGG AGA  GAUC    UGGGU  UGG     GG CUGACAGA AGAGAGUGAGCAC CACGGU    UCUUAGCAUG C A  ||||  |||||||||| |||  ||||    |||||  |||     || |||||||| ||||||||||||| ||||||    |||||||||| |  ACAG  GACUCUCUUC UCU  UUAG    ACCCG  ACC     CC GACUGUCU UCUCUCACUCGUG GUGUCG    AGGGUCGUAC G G G    UU          C   AA    UAUA     -U   ACUUG  -        A             C      ----          C A |
Stem-loop sequence | UUGUCUUGAGAGGGGAAGAGAUCUCUAUGGGUUUUGGAGGUCUGACAGAAGAGAGUGAGCACACACGGUGCUUUCUUAGCAUGCAAGAGCCAUGCUGGGAGCUGUGCGUGCUCACUCUCUAUCUGUCAGCCGUUCACCAUGCCCAAUAUGAUUAAUCUCCUUCUCUCAGUUGACAG |
1 | PMID:12101121
"MicroRNAs in plants"; Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP; Genes Dev. 16:1616-1626(2002). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |