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BaseInfo

ncRNA ID novel_vvi_miR924
Species Vitis vinifera
Class miRNA
Genome position Chr15:5311401-5311486 [-]
Reference genome 12X
Source SRR1528363;SRR1528365;SRR1528368;SRR1528370;SRR1528374;SRR1528391;SRR1528406
Length 24
Mature sequence(if miRNA) 63 - AAAAUAGUCAAAGCCGUAGUCACC - 86
Stem-loop(if miRNA) --     A                 C              ACU
  AAAAU GUCAAAGCCGUAGUCAC AACUACGGUUUUAA   U
  ||||| ||||||||||||||||| ||||||||||||||
  UUUUA CAGUUUUGGCAUUAGUG UUGGUGCCAAAAUU   A
AU     C                 U              GAA
Stem-loop sequence AAAAUAGUCAAAGCCGUAGUCACCAACUACGGUUUUAAACUUAAAGUUAAAACCGUGGUUUGUGAUUACGGUUUUGACCAUUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010658998.2
ncRNA:24   CCACUGAUGCCGAAACUGAUAAAA   1
  |||||||||||||||||=||||||
targets:6   GGUGACUACGGCUUUGAUUAUUUU   29

1.5 PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA NA coding protein psRNATarget