ncRNA ID | novel_vvi_miR924 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr15:5311401-5311486 [-] |
Reference genome | 12X |
Source | SRR1528363;SRR1528365;SRR1528368;SRR1528370;SRR1528374;SRR1528391;SRR1528406 |
Length | 24 |
Mature sequence(if miRNA) | 63 - AAAAUAGUCAAAGCCGUAGUCACC - 86 |
Stem-loop(if miRNA) |
--     A                 C              ACU   AAAAU GUCAAAGCCGUAGUCAC AACUACGGUUUUAA   U   ||||| ||||||||||||||||| ||||||||||||||   UUUUA CAGUUUUGGCAUUAGUG UUGGUGCCAAAAUU   A AU     C                 U              GAA |
Stem-loop sequence | AAAAUAGUCAAAGCCGUAGUCACCAACUACGGUUUUAAACUUAAAGUUAAAACCGUGGUUUGUGAUUACGGUUUUGACCAUUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658998.2 |
|
1.5 | PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA | NA | coding protein | psRNATarget |