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BaseInfo

ncRNA ID novel_vvi_miR923
Species Vitis vinifera
Class miRNA
Genome position Chr15:5429283-5429362 [-]
Reference genome 12X
Source SRR1528363
Length 21
Mature sequence(if miRNA) 1 - UCUCAAGAGAUCCUAACAGGC - 21
Stem-loop(if miRNA) --                 A             CU   UC
  UUGUUAGGAUCUCUUGA AAGCCUUCUGGUG  UGU  A
  ||||||||||||||||| |||||||||||||  |||
  GACAAUCCUAGAGAACU UUCGGAAGACCAC  ACG  U
CG                 C             UU   UG
Stem-loop sequence UUGUUAGGAUCUCUUGAAAAGCCUUCUGGUGCUUGUUCAUGUGCAUUCACCAGAAGGCUUCUCAAGAGAUCCUAACAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA157267.1
ncRNA:21   CGGACAAUCCUAGAGAACUCU   1
  **|||||||||||||||*||*
targets:1601   AGCUGUUAGGAUCUCUUCAGU   1621

2.5 TSA: Vitis vinifera Locus_12492_Transcript_10/10_Confidence_0.295.Vivi mRNA sequence NA coding protein psRNATarget
XM_010665867.2
ncRNA:21   CGGACAAUCCUAGAGAACUCU   1
  **|||||||||||||||*||*
targets:12440   AGCUGUUAGGAUCUCUUCAGU   12460

2.5 PREDICTED: Vitis vinifera uncharacterized LOC100260794 (LOC100260794), mRNA NA coding protein psRNATarget