ncRNA ID | novel_vvi_miR923 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr15:5429283-5429362 [-] |
Reference genome | 12X |
Source | SRR1528363 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCUCAAGAGAUCCUAACAGGC - 21 |
Stem-loop(if miRNA) |
--                 A             CU   UC   UUGUUAGGAUCUCUUGA AAGCCUUCUGGUG  UGU  A   ||||||||||||||||| |||||||||||||  |||   GACAAUCCUAGAGAACU UUCGGAAGACCAC  ACG  U CG                 C             UU   UG |
Stem-loop sequence | UUGUUAGGAUCUCUUGAAAAGCCUUCUGGUGCUUGUUCAUGUGCAUUCACCAGAAGGCUUCUCAAGAGAUCCUAACAGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA157267.1 |
|
2.5 | TSA: Vitis vinifera Locus_12492_Transcript_10/10_Confidence_0.295.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010665867.2 |
|
2.5 | PREDICTED: Vitis vinifera uncharacterized LOC100260794 (LOC100260794), mRNA | NA | coding protein | psRNATarget |