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BaseInfo

ncRNA ID	novel_vvi_miR869
Species	Vitis vinifera
Class	miRNA
Genome position	Chr18:8137865-8137979 [-]
Reference genome	12X
Source	SRR1528361
Length	24
Mature sequence(if miRNA)	1 - UUUUCCCUGGGAACUCGUCUUUCC - 24
Stem-loop(if miRNA)	--              UUUA     -----U                -----UA        U   AGAGACGAGUUCCC    GAAAA      UUUUUUUUUUUAAAUU       AUUUAGGA U   ||||||||||||||    |||||      ||||||||||||||||       ||||||||   UUUCUGCUCAAGGG    CUUUU      AAAAAAAAAAAUUUAA       UAAAUUUU U CC              -UCC     UAUUAU                UAAAAAA        U
Stem-loop sequence	AGAGACGAGUUCCCUUUAGAAAAUUUUUUUUUUUUAAAUUUAAUUUAGGAUUUUUUUUAAAUAAAAAAUAAUUUAAAAAAAAAAAUAUUAUUUUUCCCUGGGAACUCGUCUUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
FQ385215.1	ncRNA:24   CCUUUCUGCUCAAGGGUCCCUUUU   1   **|=|*|||=*||||||||||||| targets:11   CAAGAAACGGAUUCCCAGGGAAAA   34 Target Full Sequence	3.0	Vitis vinifera clone SS0AEB32YP22	NA	coding protein	psRNATarget
FQ380302.1	ncRNA:24   CCUUUCUGCUCAAGGGUCCCUUUU   1   **|=|*|||=*||||||||||||| targets:53   CAAGAAACGGAUUCCCAGGGAAAA   76 Target Full Sequence	3.0	Vitis vinifera clone SS0ACG72YK01	NA	coding protein	psRNATarget
XM_002282435.3	ncRNA:24   CCUUUCUGCUCAAGGGUCCCUUUU   1   **|=|*|||=*||||||||||||| targets:94   CAAGAAACGGAUUCCCAGGGAAAA   117 Target Full Sequence	3.0	PREDICTED: Vitis vinifera mitochondrial outer membrane protein porin of 34 kDa (LOC100264665), mRNA	NA	coding protein	psRNATarget
KA146457.1	ncRNA:24   CCUUUCUGCUCAAGGGUCCCUUUU   1   **|=|*|||=*||||||||||||| targets:239   CAAGAAACGGAUUCCCAGGGAAAA   262 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_1631_Transcript_4/4_Confidence_0.750.Vivi mRNA sequence	NA	coding protein	psRNATarget