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BaseInfo

ncRNA ID novel_vvi_miR860
Species Vitis vinifera
Class miRNA
Genome position Chr17:15929731-15929775 [+]
Reference genome 12X
Source SRR1528361
Length 21
Mature sequence(if miRNA) 25 - UGUCCGGACGUCUUUUGCAGG - 45
Stem-loop(if miRNA) --AU       UG         A
    CGGAGGG  UGUCCGGAC A
    |||||||  ||||||||| C
    GUUUUCU  GCAGGCCUG C
GGAC       --         U
Stem-loop sequence AUCGGAGGGUGUGUCCGGACAACCUGUCCGGACGUCUUUUGCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019218858.1
ncRNA:21   GGACGUUUUCUGCAGGCCUGU   1
  |||||||||||=|||||||||
targets:241   CCUGCAAAAGAUGUCCGGACA   261

1.5 PREDICTED: Vitis vinifera L-type lectin-domain containing receptor kinase VIII.2 (LOC100241713), mRNA NA coding protein psRNATarget