ncRNA ID | novel_vvi_miR859 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:4950999-4951101 [+] |
Reference genome | 12X |
Source | SRR1528361;SRR2029783;SRR2029784 |
Length | 23 |
Mature sequence(if miRNA) | 81 - AGGGAAGUUGGGUUUGUUUUGGG - 103 |
Stem-loop(if miRNA) |
--            C                             AGACACCCA  A   CAAAACAAACCC ACUUCCCUUCCCCAUGGCUCUGAUACCAU         GG C   |||||||||||| |||||||||||||||||||||||||||||         ||   GUUUUGUUUGGG UGAAGGGAAGGGGUACCGAGACUAUGGUA         CC A GG            U                             ---------  C |
Stem-loop sequence | CAAAACAAACCCCACUUCCCUUCCCCAUGGCUCUGAUACCAUAGACACCCAGGACACCCAUGGUAUCAGAGCCAUGGGGAAGGGAAGUUGGGUUUGUUUUGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA136362.1 |
|
2.0 | TSA: Vitis vinifera Locus_14043_Transcript_5/13_Confidence_0.345.Vivi mRNA sequence | NA | coding protein | psRNATarget |