ncRNA ID | novel_vvi_miR858 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:2685808-2685897 [-] |
Reference genome | 12X |
Source | SRR1528361 |
Length | 24 |
Mature sequence(if miRNA) | 67 - UAAGUUGUUAGGUAAUGGGGCAAC - 90 |
Stem-loop(if miRNA) |
--                 G G       AUA    ----UCA  CU   UAAGUUGUUAGGUAAUG G CAACAAU   UAUC       GG  A   ||||||||||||||||| | |||||||   ||||       ||   AUUCAACAAUCUAUUAU C GUUGUUA   AUAG       CC  A GA                 A G       AAG    UUUAUUA  AC |
Stem-loop sequence | UAAGUUGUUAGGUAAUGGGGCAACAAUAUAUAUCUCAGGCUAACACCAUUAUUUGAUAGAAAUUGUUGGCAUAUUAUCUAACAACUUAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA148776.1 |
|
2.5 | TSA: Vitis vinifera Locus_2948_Transcript_1/3_Confidence_0.571.Vivi mRNA sequence | NA | coding protein | psRNATarget |