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BaseInfo

ncRNA ID	novel_vvi_miR857
Species	Vitis vinifera
Class	miRNA
Genome position	Chr16:9650754-9650825 [-]
Reference genome	12X
Source	SRR1528361
Length	24
Mature sequence(if miRNA)	1 - UUAGUUAUGUUGGAUGAUGUCAAC - 24
Stem-loop(if miRNA)	--                       AUA       U   UGACAUCAUCCAACAUAACUAAA   AACUUGU A   |||||||||||||||||||||||   ||||||| U   ACUGUAGUAGGUUGUAUUGAUUU   UUGGAUA C CA                       -GA       A
Stem-loop sequence	UGACAUCAUCCAACAUAACUAAAAUAAACUUGUUAUCAAUAGGUUAGUUUAGUUAUGUUGGAUGAUGUCAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA142775.1	ncRNA:24   CAACUGUAGUAGGUUGUAUUGAUU   1   |||*|||||||||||||||||||| targets:1299   GUUAACAUCAUCCAACAUAACUAA   1322 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_3457_Transcript_8/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142774.1	ncRNA:24   CAACUGUAGUAGGUUGUAUUGAUU   1   |||*|||||||||||||||||||| targets:1399   GUUAACAUCAUCCAACAUAACUAA   1422 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_3457_Transcript_5/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA139149.1	ncRNA:24   CAACUGUAGUAGGUUGUAUUGAUU   1   *|||||||||*||||||||||||| targets:1983   AUUGACAUCAACCAACAUAACUAA   2006 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_1202_Transcript_8/9_Confidence_0.400.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA159067.1	ncRNA:24   CAACUGUAGUAGGUUGUAUUGAUU   1   |||*|||||||||||=|||||||| targets:1352   GUUAACAUCAUCCAAUAUAACUAA   1375 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_4980_Transcript_3/7_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_019224211.1	ncRNA:24   CAACUGUAGUAGGUUGUAUUGAUU   1   *||||=||||*||||||||||||| targets:6975   AUUGAUAUCAACCAACAUAACUAA   6998 Target Full Sequence	2.0	PREDICTED: Vitis vinifera uncharacterized LOC100263302 (LOC100263302), transcript variant X2, mRNA	NA	coding protein	psRNATarget
KA167153.1	ncRNA:24   CAACUGUAGUAGGUUGUAUUGAUU   1   *||||=|||||*|||||||||||| targets:3479   AUUGAUAUCAUGCAACAUAACUAA   3502 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_485_Transcript_1/10_Confidence_0.492.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA167155.1	ncRNA:24   CAACUGUAGUAGGUUGUAUUGAUU   1   *||||=|||||*|||||||||||| targets:3697   AUUGAUAUCAUGCAACAUAACUAA   3720 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_485_Transcript_5/10_Confidence_0.429.Vivi mRNA sequence	NA	coding protein	psRNATarget