| ncRNA ID | osa-miR393a |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:2309149-2309263 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 85 - UCCAAAGGGAUCGCAUUGAUC - 105 |
| Stem-loop(if miRNA) |
U A U U UC - --------- CU U GGGGAAGC UCCAAAGGGAUCGCAU GAUCC UCA GCU CU CG CGCU C |||||||| |||||||||||||||| ||||| ||| ||| || || |||| C CUCCUUCG AGGUUUUCCUAGCGUA CUAGG AGU CGA GA GC GCGG A U G - C -U C ACAUCUGCU UG U |
| Stem-loop sequence | UGGGGAAGCAUCCAAAGGGAUCGCAUUGAUCCUUCAUCGCUCUCGCUCGCUUCCAUGGCGGUCGUCGUCUACAAGCAGCUUGACGGAUCAUGCGAUCCUUUUGGAGGCUUCCUCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK060126.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:006-308-H11, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| CT834644.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI006O22, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK066367.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013063P07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015773313.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333246 (LOC4333246), mRNA | uncharacterized LOC4333246(LOC4333246) | coding protein | psRNATarget |
| 1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |