ncRNA ID | novel_vvi_miR851 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:7137399-7137477 [+] |
Reference genome | 12X |
Source | SRR1528361;SRR1528371;SRR1528377;SRR1528383;SRR1528384;SRR1528393;SRR1528396;SRR1528398;SRR1528399;SRR1528402;SRR1528412;SRR2029784 |
Length | 25 |
Mature sequence(if miRNA) | 1 - UGAAGCUGCCAGCAUGAUCUAAGCU - 25 |
Stem-loop(if miRNA) |
--           G         AG        UUGCCCA   UGAAGCUGCCA CAUGAUCUA  CUUUUCUG       C   ||||||||||| |||||||||  ||||||||   ACUUUGACGGU GUACUAGAU  GAAAGGAC       C CC           -         CA        CUCUUUC |
Stem-loop sequence | UGAAGCUGCCAGCAUGAUCUAAGCUUUUCUGUUGCCCACCCUUUCUCCAGGAAAGACUAGAUCAUGUGGCAGUUUCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA173445.1 |
|
0.0 | TSA: Vitis vinifera Locus_24147_Transcript_2/2_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA173444.1 |
|
0.0 | TSA: Vitis vinifera Locus_24147_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |