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BaseInfo

ncRNA ID novel_vvi_miR851
Species Vitis vinifera
Class miRNA
Genome position Chr14:7137399-7137477 [+]
Reference genome 12X
Source SRR1528361;SRR1528371;SRR1528377;SRR1528383;SRR1528384;SRR1528393;SRR1528396;SRR1528398;SRR1528399;SRR1528402;SRR1528412;SRR2029784
Length 25
Mature sequence(if miRNA) 1 - UGAAGCUGCCAGCAUGAUCUAAGCU - 25
Stem-loop(if miRNA) --           G         AG        UUGCCCA
  UGAAGCUGCCA CAUGAUCUA  CUUUUCUG       C
  ||||||||||| |||||||||  ||||||||
  ACUUUGACGGU GUACUAGAU  GAAAGGAC       C
CC           -         CA        CUCUUUC
Stem-loop sequence UGAAGCUGCCAGCAUGAUCUAAGCUUUUCUGUUGCCCACCCUUUCUCCAGGAAAGACUAGAUCAUGUGGCAGUUUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA173445.1
ncRNA:25   UCGAAUCUAGUACGACCGUCGAAGU   1
  ||||-||||||||||||||||||||
targets:615   AGCU-AGAUCAUGCUGGCAGCUUCA   638

0.0 TSA: Vitis vinifera Locus_24147_Transcript_2/2_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget
KA173444.1
ncRNA:25   UCGAAUCUAGUACGACCGUCGAAGU   1
  ||||-||||||||||||||||||||
targets:648   AGCU-AGAUCAUGCUGGCAGCUUCA   671

0.0 TSA: Vitis vinifera Locus_24147_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget