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BaseInfo

ncRNA ID	novel_vvi_miR848
Species	Vitis vinifera
Class	miRNA
Genome position	Chr14:12834281-12834337 [-]
Reference genome	12X
Source	SRR1528361
Length	23
Mature sequence(if miRNA)	35 - GAUGCUAAUUCUUUUGUUGAUAG - 57
Stem-loop(if miRNA)	--GA     A         U        G     UGCUA UUCUUUUGU GAUAGUUG A     ||||| ||||||||| ||||||||     ACGGU AAGGAGACG UUGUCGGC A UUAA     A         -        A
Stem-loop sequence	GAUGCUAAUUCUUUUGUUGAUAGUUGGAAACGGCUGUUGCAGAGGAAAUGGCAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019219435.1	ncRNA:23   GAUAGUUGUUUUCUUAAUCGUAG   1   **=|||=|||*|||||||||||| targets:1461   AAGUCAGCAACAGAAUUAGCAUC   1483 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC100244513 (LOC100244513), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019219434.1	ncRNA:23   GAUAGUUGUUUUCUUAAUCGUAG   1   **=|||=|||*|||||||||||| targets:1461   AAGUCAGCAACAGAAUUAGCAUC   1483 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC100244513 (LOC100244513), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019219433.1	ncRNA:23   GAUAGUUGUUUUCUUAAUCGUAG   1   **=|||=|||*|||||||||||| targets:1461   AAGUCAGCAACAGAAUUAGCAUC   1483 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC100244513 (LOC100244513), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019219432.1	ncRNA:23   GAUAGUUGUUUUCUUAAUCGUAG   1   **=|||=|||*|||||||||||| targets:1461   AAGUCAGCAACAGAAUUAGCAUC   1483 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC100244513 (LOC100244513), transcript variant X1, mRNA	NA	coding protein	psRNATarget
KA160907.1	ncRNA:23   GAUAGUUGUUUUCUUAAUCGUAG   1   **=|||=|||*|||||||||||| targets:1618   AAGUCAGCAACAGAAUUAGCAUC   1640 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_3681_Transcript_5/7_Confidence_0.700.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA160905.1	ncRNA:23   GAUAGUUGUUUUCUUAAUCGUAG   1   **=|||=|||*|||||||||||| targets:1456   AAGUCAGCAACAGAAUUAGCAUC   1478 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_3681_Transcript_3/7_Confidence_0.700.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA160906.1	ncRNA:23   GAUAGUUGUUUUCUUAAUCGUAG   1   **=|||=|||*|||||||||||| targets:1618   AAGUCAGCAACAGAAUUAGCAUC   1640 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_3681_Transcript_4/7_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget