ncRNA ID | novel_vvi_miR845 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:28540331-28540426 [-] |
Reference genome | 12X |
Source | SRR1528361 |
Length | 24 |
Mature sequence(if miRNA) | 73 - UAUACUGAAUGUGUCUCUUUAAGA - 96 |
Stem-loop(if miRNA) |
--         U                       AG     A     U   UAUACUGAA GUGUCUCUUUAAGAGACACUUUU  UAUAA UCCAA U   ||||||||| |||||||||||||||||||||||  ||||| |||||   AUAUGAUUU CACAGAGAAGUUUUCUGUGGAAG  AUGUU AGGUU U AU         C                       --     A     U |
Stem-loop sequence | UAUACUGAAUGUGUCUCUUUAAGAGACACUUUUAGUAUAAAUCCAAUUUUUUGGAAUUGUAGAAGGUGUCUUUUGAAGAGACACCUUUAGUAUAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA170781.1 |
|
2.5 | TSA: Vitis vinifera Locus_19687_Transcript_3/3_Confidence_0.714.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA170780.1 |
|
2.5 | TSA: Vitis vinifera Locus_19687_Transcript_2/3_Confidence_0.714.Vivi mRNA sequence | NA | coding protein | psRNATarget |