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BaseInfo

ncRNA ID novel_vvi_miR841
Species Vitis vinifera
Class miRNA
Genome position Chr13:10444679-10444823 [-]
Reference genome 12X
Source SRR1528361;SRR1528364;SRR1528370;SRR1528389;SRR1528406;SRR1528407
Length 24
Mature sequence(if miRNA) 122 - CCUGCGGAAUGGAGCUUUGGCUGC - 145
Stem-loop(if miRNA) --CC  C       A           A         A    C        G    ---       CG      A
    UG GGAAUGG GCUUUGGCUGC AAAUUGGGA UUUU AUGCUUUG AGCU   UCGCAGC  UUUCGC G
    || ||||||| ||||||||||| ||||||||| |||| |||||||| ||||   |||||||  ||||||
    AC CUUUACC CGAAACCGACG UUUAACCCU AAAA UACGAAGC UUGA   AGCGUCG  AAAGCG C
UAGU  A       C           C         C    A        G    CAA       AU      U
Stem-loop sequence CCUGCGGAAUGGAGCUUUGGCUGCAAAAUUGGGAAUUUUCAUGCUUUGGAGCUUCGCAGCCGUUUCGCAGCUGCGAAAUAGCUGCGAAACAGUUGCGAAGCAUAAAAACUCCCAAUUUCGCAGCCAAAGCCCCAUUUCACAUGAU