ncRNA ID | novel_vvi_miR841 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:10444679-10444823 [-] |
Reference genome | 12X |
Source | SRR1528361;SRR1528364;SRR1528370;SRR1528389;SRR1528406;SRR1528407 |
Length | 24 |
Mature sequence(if miRNA) | 122 - CCUGCGGAAUGGAGCUUUGGCUGC - 145 |
Stem-loop(if miRNA) |
--CC  C       A           A         A    C        G    ---       CG      A     UG GGAAUGG GCUUUGGCUGC AAAUUGGGA UUUU AUGCUUUG AGCU   UCGCAGC  UUUCGC G     || ||||||| ||||||||||| ||||||||| |||| |||||||| ||||   |||||||  ||||||     AC CUUUACC CGAAACCGACG UUUAACCCU AAAA UACGAAGC UUGA   AGCGUCG  AAAGCG C UAGU  A       C           C         C    A        G    CAA       AU      U |
Stem-loop sequence | CCUGCGGAAUGGAGCUUUGGCUGCAAAAUUGGGAAUUUUCAUGCUUUGGAGCUUCGCAGCCGUUUCGCAGCUGCGAAAUAGCUGCGAAACAGUUGCGAAGCAUAAAAACUCCCAAUUUCGCAGCCAAAGCCCCAUUUCACAUGAU |