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BaseInfo

ncRNA ID	novel_vvi_miR839
Species	Vitis vinifera
Class	miRNA
Genome position	Chr12:6650519-6650607 [+]
Reference genome	12X
Source	SRR1528361
Length	24
Mature sequence(if miRNA)	66 - UUAUGUUGGAUGAUGUUAACAUGU - 89
Stem-loop(if miRNA)	--                              G  ACUUAUUAA   AUGUUAACAUCAUCCAACAUAACUAAUUAA UA         U   |||||||||||||||||||||||||||||| ||         A   UACAAUUGUAGUAGGUUGUAUUGAUUAAUU AU         U UG                              G  AUAACCUAC
Stem-loop sequence	AUGUUAACAUCAUCCAACAUAACUAAUUAAGUAACUUAUUAAUAUCAUCCAAUAUAGUUAAUUAGUUAUGUUGGAUGAUGUUAACAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA142775.1	ncRNA:24   UGUACAAUUGUAGUAGGUUGUAUU   1   ||=||||||||||||||||||||| targets:1295   ACGUGUUAACAUCAUCCAACAUAA   1318 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_3457_Transcript_8/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142774.1	ncRNA:24   UGUACAAUUGUAGUAGGUUGUAUU   1   ||=||||||||||||||||||||| targets:1395   ACGUGUUAACAUCAUCCAACAUAA   1418 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_3457_Transcript_5/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA159067.1	ncRNA:24   UGUACAAUUGUAGUAGGUUGUAUU   1   ||*||||||||||||||||=|||| targets:1348   ACUUGUUAACAUCAUCCAAUAUAA   1371 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_4980_Transcript_3/7_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010653835.2	ncRNA:24   UGUACAAUUGUAGUAGGUUGUAUU   1   *|||*|*|||||||||*||||||| targets:1173   CCAUCUGAACAUCAUCAAACAUAA   1196 Target Full Sequence	2.5	PREDICTED: Vitis vinifera TVP38/TMEM64 family membrane protein slr0305 (LOC100240838), mRNA	NA	coding protein	psRNATarget