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BaseInfo

ncRNA ID	novel_vvi_miR835
Species	Vitis vinifera
Class	miRNA
Genome position	Chr13:20713289-20713357 [-]
Reference genome	12X
Source	SRR1528360
Length	24
Mature sequence(if miRNA)	1 - GACAGUGAUUUUAGGAAGUGUUUC - 24
Stem-loop(if miRNA)	--                          A A  C   AACACUUCCUAAAAUUAUUGUCAAAU G CU U   |||||||||||||||||||||||||| | || U   UUGUGAAGGAUUUUAGUGACAGUUUA C GA A CU                          C C  A
Stem-loop sequence	AACACUUCCUAAAAUUAUUGUCAAAUAGACUCUUAAAGCCCAUUUGACAGUGAUUUUAGGAAGUGUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA166591.1	ncRNA:24   CUUU-------GUGAAGGAUUUUAGUGACAG   1   ||||-------|=|||||||||||||||||| targets:876   GAAAUGUUUCACGCUUCCUAAAAUCACUGUC   906 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_1103_Transcript_2/9_Confidence_0.406.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA154839.1	ncRNA:24   CUUUGUGAAGGAUUUUAGUGACAG   1   |||||||||||||||||||=|||| targets:2681   GAAACACUUCCUAAAAUCAUUGUC   2704 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_4953_Transcript_6/7_Confidence_0.478.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA141295.1	ncRNA:24   CUUUGUGAAGGAUUUUAGUGACAG   1   ||||=||||||||||||||||*|| targets:666   GAAAUACUUCCUAAAAUCACUAUC   689 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_7662_Transcript_5/10_Confidence_0.136.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA146990.1	ncRNA:24   CUUUGUGAAGGAUUUUAGUGACAG   1   *||||||||||||||||||||*|| targets:3465   AAAACACUUCCUAAAAUCACUAUC   3488 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_5272_Transcript_7/11_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_019219250.1	ncRNA:24   CUUUGUGAAGGAUUUUAGUGACAG   1   ||||||||||*|||||*||||||| targets:1757   GAAACACUUCAUAAAACCACUGUC   1780 Target Full Sequence	2.5	PREDICTED: Vitis vinifera serine/threonine-protein kinase At3g07070 (LOC100251076), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010650664.2	ncRNA:24   CUUUGUGAAGGAUUUUAGUGACAG   1   ||||||||||*|||||*||||||| targets:1787   GAAACACUUCAUAAAACCACUGUC   1810 Target Full Sequence	2.5	PREDICTED: Vitis vinifera serine/threonine-protein kinase At3g07070 (LOC100251076), transcript variant X1, mRNA	NA	coding protein	psRNATarget
KA171163.1	ncRNA:24   CUUUGUGAAGGAUUUUAGUGACAG   1   ||||=|=||=*||||||||||||| targets:990   GAAAUAUUUUGUAAAAUCACUGUC   1013 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_6292_Transcript_2/4_Confidence_0.636.Vivi mRNA sequence	NA	coding protein	psRNATarget