ncRNA ID | novel_vvi_miR833 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr10:6752010-6752076 [-] |
Reference genome | 12X |
Source | SRR1528360;SRR2029784 |
Length | 24 |
Mature sequence(if miRNA) | 44 - AUUUGGUUGGUGAUGAGAUAGGAU - 67 |
Stem-loop(if miRNA) |
--          UG                UAU   AUUUGGUUGG  AUGAGAUAGGAUAGGU   C   ||||||||||  ||||||||||||||||   U   UAAACUAACU  UAUUCUAUUUUAUUCA   C CA          UA                CUA |
Stem-loop sequence | AUUUGGUUGGUGAUGAGAUAGGAUAGGUUAUCUCAUCACUUAUUUUAUCUUAUAUUCAAUCAAAUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA137491.1 |
|
2.0 | TSA: Vitis vinifera Locus_6590_Transcript_4/6_Confidence_0.400.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA141942.1 |
|
2.5 | TSA: Vitis vinifera Locus_1095_Transcript_10/12_Confidence_0.381.Vivi mRNA sequence | NA | coding protein | psRNATarget |