ncRNA ID | novel_vvi_miR832 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr9:9913946-9913997 [+] |
Reference genome | 12X |
Source | SRR1528360 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCAUAGGUUUAGAAGAAUGAAGCC - 24 |
Stem-loop(if miRNA) |
-  --       -U       U       GC  AUAGGUU  AGAAGAA GAAGCC  ||  |||||||  ||||||| |||||U  CG  UGUUCAA  UCUUCUU CUUCGU U  GU       CU       -      |
Stem-loop sequence | GCAUAGGUUUAGAAGAAUGAAGCCUUGCUUCUUCUUCUUCAACUUGUUGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002268562.4 |
|
2.5 | PREDICTED: Vitis vinifera leucine-rich repeat receptor-like protein kinase TDR (LOC100266344), mRNA | NA | coding protein | psRNATarget | |||||||||
KA148943.1 |
|
2.5 | TSA: Vitis vinifera Locus_4944_Transcript_4/4_Confidence_0.500.Vivi mRNA sequence | NA | coding protein | psRNATarget |