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BaseInfo

ncRNA ID	novel_vvi_miR823
Species	Vitis vinifera
Class	miRNA
Genome position	Chr8:8617161-8617279 [+]
Reference genome	12X
Source	SRR1048204
Length	24
Mature sequence(if miRNA)	1 - AGUGCGUUUGAGAGUGAUUUUAGA - 24
Stem-loop(if miRNA)	--   G                   A    A   A    A    C       -    GAU   AGU CGUUUGAGAGUGAUUUUAG AAAC UUU UAGU UUUU AACAUUU AAAU   A   ||| ||||||||||||||||||| |||| ||| |||| |||| ||||||| ||||   UCA GCAAACUUUUAUUAAGAUC UUUG AAA AUUA AAAA UUGUAAA UUUA   A UA   G                   C    C   A    G    A       C    AAA
Stem-loop sequence	AGUGCGUUUGAGAGUGAUUUUAGAAAACAUUUAUAGUAUUUUCAACAUUUAAAUGAUAAAAAAUUUCAAAUGUUAAAAAGAUUAAAAACGUUUCCUAGAAUUAUUUUCAAACGGACUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA155688.1	ncRNA:24   AGAUUUUAGUGAGAGUUUGCGUGA   1   ||||=||||||||||||||||||| targets:1552   UCUAGAAUCACUCUCAAACGCACU   1575 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_13686_Transcript_2/6_Confidence_0.571.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA161315.1	ncRNA:21   UUUUAGUGAGAGUUUGCGUGA   1   =||||||*||||||||||||| targets:1   GAAAUCAAUCUCAAACGCACU   21 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_11487_Transcript_12/19_Confidence_0.077.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA162689.1	ncRNA:24   AGAUUUUAGUGAGAGUUUGCGUGA   1   |=||=|||||||*||||||||||| targets:2060   UUUAGAAUCACUGUCAAACGCACU   2083 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_9958_Transcript_4/12_Confidence_0.402.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002271269.3	ncRNA:24   AGAUUUUAGUGAGAGUUUGCGUGA   1   |*|||||||||||*|||||||||| targets:4099   UAUAAAAUCACUCCCAAACGCACU   4122 Target Full Sequence	1.5	PREDICTED: Vitis vinifera ABC transporter B family member 9-like (LOC100265902), mRNA	NA	coding protein	psRNATarget
KA155688.1	ncRNA:24   AGAUUUUAGUGAGAGUUUGCGUGA   1   **|||||*||||*||||||||||| targets:1679   AAUAAAAACACUAUCAAACGCACU   1702 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_13686_Transcript_2/6_Confidence_0.571.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA151194.1	ncRNA:24   AGA-UUUUAGUGAGAGUUUGCGUGA   1   |||-|||||=|||=||||||||||| targets:11   UCUCAAAAUUACUUUCAAACGCACU   35 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_610_Transcript_4/10_Confidence_0.303.Vivi mRNA sequence	NA	coding protein	psRNATarget