| ncRNA ID | novel_vvi_miR819 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr4:3611205-3611420 [+] |
| Reference genome | 12X |
| Source | SRR1528360 |
| Length | 24 |
| Mature sequence(if miRNA) | 193 - AUUAAAAUUUAAAUUGUGGGGUAC - 216 |
| Stem-loop(if miRNA) |
-- U CA C -------- A A CA CAAA - UAU ACCUCACAAUUU AAUUUUAAUAAAAUCUUUGUU UAUUAUU UUCCUAUUGUUUUGCUAAU GCUUUCGC AAAUUU UG UACAAAU GG GA A |||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||| || ||||||| || || U UGGGGUGUUAAA UUAAAAUUAUUUUAGAAACAA GUAAUAA AAGGAUAACAAAACGAUUA UGAAAGUG UUUAAA GC AUGUUUA CC CU U CA U AC A AAACAUCU C C AC AAUA A UUA |
| Stem-loop sequence | ACCUCACAAUUUUAAUUUUAAUAAAAUCUUUGUUCAUAUUAUUCUUCCUAUUGUUUUGCUAAUGCUUUCGCAAAAUUUAUGCAUACAAAUCAAAGGGAUAUAUUAUUUCACCAUAAAUUUGUACACGCAAAUUUCGUGAAAGUUCUACAAAAUUAGCAAAACAAUAGGAAAAAUAAUGCAAACAAAGAUUUUAUUAAAAUUUAAAUUGUGGGGUAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA153943.1 |
|
2.0 | TSA: Vitis vinifera Locus_9505_Transcript_14/14_Confidence_0.139.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA141232.1 |
|
3.0 | TSA: Vitis vinifera Locus_10312_Transcript_10/11_Confidence_0.027.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA136472.1 |
|
3.0 | TSA: Vitis vinifera Locus_19085_Transcript_6/9_Confidence_0.586.Vivi mRNA sequence | NA | coding protein | psRNATarget |