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BaseInfo

ncRNA ID novel_vvi_miR799
Species Vitis vinifera
Class miRNA
Genome position Chr14:7881225-7881310 [-]
Reference genome 12X
Source SRR1528360
Length 24
Mature sequence(if miRNA) 63 - AAAAUAGUCAAAGUCGUAGUCACC - 86
Stem-loop(if miRNA) --              CG              A       ACU
  AAAAUAGUCAAAGU  UAGUCACCAACUAC GUUUUAA   U
  ||||||||||||||  |||||||||||||| |||||||
  UUUUAUCAGUUUUA  AUCAGUGGUUGAUG CAAAAUU   A
AU              AG              C       GAA
Stem-loop sequence AAAAUAGUCAAAGUCGUAGUCACCAACUACAGUUUUAAACUUAAAGUUAAAACCGUAGUUGGUGACUAGAAUUUUGACUAUUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010658998.2
ncRNA:24   CCACUGAUGCUGAAACUGAUAAAA   1
  ||||||||||=||||||=||||||
targets:6   GGUGACUACGGCUUUGAUUAUUUU   29

2.5 PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA NA coding protein psRNATarget