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BaseInfo

ncRNA ID osa-miR1859
Species Oryza sativa
Class miRNA
Genome position Chr1:673278-673374 [-]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 11 - UUUCCUAUGACGUCCAUUCCAA - 32
Stem-loop(if miRNA) --      UG A          -     A       A G     UGAACC
  GGGAGU  U GGAAUGGAUG CGUAG GAAAGAA U AAAUC      A
  ||||||  | |||||||||| ||||| ||||||| | |||||
  CCUUUA  A CCUUACCUGC GUAUC CUUUCUU A UUUAG      G
GA      GU A          A     -       - G     UGUUUA
Stem-loop sequence GGGAGUUGUAGGAAUGGAUGCGUAGAGAAAGAAAUGAAAUCUGAACCAGAUUUGUGAUUUGAUUCUUUCCUAUGACGUCCAUUCCAAUGAUUUCCAG

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).
2 PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds";
Xue LJ, Zhang JJ, Xue HW;
Nucleic Acids Res. 37:916-930(2009).