ncRNA ID | lus-miR828a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | NA - UCUUGCUCAAAUGAGUGUUCCA - NA |
Stem-loop(if miRNA) |
GUU         UGAAU        -    UA      U                 UC  AAACCA            GCAGUUC   -  UC    GUUAGUAGA     CACCUCUU GUGG  AACGUU CUUGCUCAAAUGAGUGU  CA      GCAAGCGAUGGA       UGG GU  A    |||||||||     |||||||| ||||  |||||| |||||||||||||||||  ||      ||||||||||||       ||| ||    UAGUUGUCU     GUGGAGAA CACU  UUGUGA GAACGGGUUUACUCGUA  GU      CGUUUGUUGUCU       ACC CA  A CUU         -----        A    --      C                 GA  ---CUA            -------   U  UA |
Stem-loop sequence | GUUGUUAGUAGAUGAAUCACCUCUUGUGGUAAACGUUUCUUGCUCAAAUGAGUGUUCCAAAACCAGCAAGCGAUGGAGCAGUUCUGGGUUCAAAUACUCCAUCUGUUGUUUGCAUCUGAGAUGCUCAUUUGGGCAAGCAGUGUUUCACAAAGAGGUGUCUGUUGAUUUC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |