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BaseInfo

ncRNA ID lus-miR828a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 22
Mature sequence(if miRNA) NA - UCUUGCUCAAAUGAGUGUUCCA - NA
Stem-loop(if miRNA) GUU         UGAAU        -    UA      U                 UC  AAACCA            GCAGUUC   -  UC
   GUUAGUAGA     CACCUCUU GUGG  AACGUU CUUGCUCAAAUGAGUGU  CA      GCAAGCGAUGGA       UGG GU  A
   |||||||||     |||||||| ||||  |||||| |||||||||||||||||  ||      ||||||||||||       ||| ||
   UAGUUGUCU     GUGGAGAA CACU  UUGUGA GAACGGGUUUACUCGUA  GU      CGUUUGUUGUCU       ACC CA  A
CUU         -----        A    --      C                 GA  ---CUA            -------   U  UA
Stem-loop sequence GUUGUUAGUAGAUGAAUCACCUCUUGUGGUAAACGUUUCUUGCUCAAAUGAGUGUUCCAAAACCAGCAAGCGAUGGAGCAGUUCUGGGUUCAAAUACUCCAUCUGUUGUUUGCAUCUGAGAUGCUCAUUUGGGCAAGCAGUGUUUCACAAAGAGGUGUCUGUUGAUUUC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).