ncRNA ID | novel_vvi_miR767 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:27357624-27357777 [+] |
Reference genome | 12X |
Source | SRR1528359;SRR1528371;SRR1528382;SRR1528385;SRR890731 |
Length | 21 |
Mature sequence(if miRNA) | 134 - CUUGUUAUUGGAUCCAUACUA - 154 |
Stem-loop(if miRNA) |
--     AAC           A                       G            G   -  C     AGUGUG   GUAUG   CCAAUAACAAG AGGCAUGUGUGGGGCAUAAUAGA AAUGCAAAGAAA GGU UG UAUUG      A   |||||   ||||||||||| ||||||||||||||||||||||| |||||||||||| ||| || |||||      U   CAUAC   GGUUAUUGUUC UCCGUACACACCCUGUAUUAUCU UUACGUUUUUUU CCA AC GUAAC      A AU     CUA           C                       G            A   U  A     AGGGUU |
Stem-loop sequence | GUAUGAACCCAAUAACAAGAAGGCAUGUGUGGGGCAUAAUAGAGAAUGCAAAGAAAGGGUUGCUAUUGAGUGUGAUAUUGGGACAAUGACAUACCAUUUUUUUGCAUUGUCUAUUAUGUCCCACACAUGCCUCCUUGUUAUUGGAUCCAUACUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA163747.1 |
|
3.0 | TSA: Vitis vinifera Locus_9547_Transcript_7/9_Confidence_0.333.Vivi mRNA sequence | NA | coding protein | psRNATarget |