ncRNA ID | novel_vvi_miR765 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:484414-484515 [+] |
Reference genome | 12X |
Source | SRR1528359 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUAGCGUCAGGAUCUUUCUCCCC - 24 |
Stem-loop(if miRNA) |
--     C    G                 C                 CUC   UAUAG GUCA GAUCUUUCUCCCCUAUC GAUGUGGGAUAUCACAG   G   ||||| |||| ||||||||||||||||| |||||||||||||||||   AUAUC CAGU CUAGAAAGAGGGGAUAG CUACACCCUGUAGUGUU   G AU     U    A                 A                 UAU |
Stem-loop sequence | UAUAGCGUCAGGAUCUUUCUCCCCUAUCCGAUGUGGGAUAUCACAGCUCGGUAUUUGUGAUGUCCCACAUCAGAUAGGGGAGAAAGAUCAUGACUCUAUAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010663553.2 |
|
2.5 | PREDICTED: Vitis vinifera cellulose synthase-like protein G2 (LOC104881920), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_019219804.1 |
|
2.5 | PREDICTED: Vitis vinifera eukaryotic translation initiation factor 1A-like (LOC104879503), mRNA | NA | coding protein | psRNATarget |