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BaseInfo

ncRNA ID novel_vvi_miR765
Species Vitis vinifera
Class miRNA
Genome position Chr16:484414-484515 [+]
Reference genome 12X
Source SRR1528359
Length 24
Mature sequence(if miRNA) 1 - UAUAGCGUCAGGAUCUUUCUCCCC - 24
Stem-loop(if miRNA) --     C    G                 C                 CUC
  UAUAG GUCA GAUCUUUCUCCCCUAUC GAUGUGGGAUAUCACAG   G
  ||||| |||| ||||||||||||||||| |||||||||||||||||
  AUAUC CAGU CUAGAAAGAGGGGAUAG CUACACCCUGUAGUGUU   G
AU     U    A                 A                 UAU
Stem-loop sequence UAUAGCGUCAGGAUCUUUCUCCCCUAUCCGAUGUGGGAUAUCACAGCUCGGUAUUUGUGAUGUCCCACAUCAGAUAGGGGAGAAAGAUCAUGACUCUAUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010663553.2
ncRNA:24   CCCCUCUUUCUAGGACUGCGAUAU   1
  |||*||||||*|=|||||||||||
targets:22   GGGAAGAAAGUUUCUGACGCUAUA   45

2.5 PREDICTED: Vitis vinifera cellulose synthase-like protein G2 (LOC104881920), mRNA NA coding protein psRNATarget
XM_019219804.1
ncRNA:24   CCCCUCUUUCUAGGACUGCGAUAU   1
  |**|||||||*|||||=|||||||
targets:560   GACGAGAAAGUUCCUGGCGCUAUA   583

2.5 PREDICTED: Vitis vinifera eukaryotic translation initiation factor 1A-like (LOC104879503), mRNA NA coding protein psRNATarget