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BaseInfo

ncRNA ID	novel_vvi_miR763
Species	Vitis vinifera
Class	miRNA
Genome position	Chr19:20218745-20218857 [+]
Reference genome	12X
Source	SRR1048201
Length	24
Mature sequence(if miRNA)	90 - UUCUAGAAUUACUAUCAAAUACAC - 113
Stem-loop(if miRNA)	--C                                CA       C       AAGU    UAUUUGAUAGUGAUUUUAGGAAACAUUUUUAA  UUUUUAA AUUUAAA    U    ||||||||||||||||||||||||||||||||  ||||||| |||||||    U    AUAAACUAUCAUUAAGAUCUUUUGUAAGAAUU  AAAGAUU UGAAUUU    U CAC                                AG       A       ACUA
Stem-loop sequence	CUAUUUGAUAGUGAUUUUAGGAAACAUUUUUAACAUUUUUAACAUUUAAAAAGUUUUAUCAUUUAAGUAUUAGAAAGAUUAAGAAUGUUUUCUAGAAUUACUAUCAAAUACAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA152600.1	ncRNA:24   CACAUAAACUAUCAUUAAGAUCUU   1   ||*|=|||||*||||||||||||| targets:741   GUAUGUUUGACAGUAAUUCUAGAA   764 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_12264_Transcript_1/3_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010654642.2	ncRNA:24   CACAUAAACUAUCAUUAAGAUCUU   1   |||*=||||=*||||||||||||| targets:2008   GUGCGUUUGGAAGUAAUUCUAGAA   2031 Target Full Sequence	2.0	PREDICTED: Vitis vinifera alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial (LOC100264660), mRNA	NA	coding protein	psRNATarget
KA135132.1	ncRNA:24   CACA--------UAAACUAUCAUUAAGAUCUU   1   *|||--------||||*|||||=||||||||| targets:1478   CUGUUAGAAUCCAUUUAAUAGUGAUUCUAGAA   1509 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_13541_Transcript_5/6_Confidence_0.722.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010648440.2	ncRNA:24   CACA--UAAACUAUCAUUAAGAUCUU   1   |*||--=||||=||||=||||||||| targets:707   GAGUCCGUUUGGUAGUGAUUCUAGAA   732 Target Full Sequence	2.5	PREDICTED: Vitis vinifera GATA transcription factor 26-like (LOC100262620), mRNA	NA	coding protein	psRNATarget
XM_019221488.1	ncRNA:24   CACAUAAACUAUCAUUAAGAUCUU   1   ***|=|||*|||||=||||||||| targets:979   ACUUGUUUAAUAGUGAUUCUAGAA   1002 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC109122975 (LOC109122975), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019221488.1	ncRNA:24   CACAUAAACUAUCAUUAAGAUCUU   1   ***|=|||*|||||=||||||||| targets:1019   ACUUGUUUAAUAGUGAUUCUAGAA   1042 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC109122975 (LOC109122975), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019221487.1	ncRNA:24   CACAUAAACUAUCAUUAAGAUCUU   1   ***|=|||*|||||=||||||||| targets:994   ACUUGUUUAAUAGUGAUUCUAGAA   1017 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC109122975 (LOC109122975), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019221487.1	ncRNA:24   CACAUAAACUAUCAUUAAGAUCUU   1   ***|=|||*|||||=||||||||| targets:1034   ACUUGUUUAAUAGUGAUUCUAGAA   1057 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC109122975 (LOC109122975), transcript variant X1, mRNA	NA	coding protein	psRNATarget