ncRNA ID | novel_vvi_miR757 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:19982698-19982753 [+] |
Reference genome | 12X |
Source | SRR1528359;SRR1528365;SRR1528368 |
Length | 24 |
Mature sequence(if miRNA) | 33 - UUUGGUCCCUGUUCACUUAAGUGC - 56 |
Stem-loop(if miRNA) |
--      A        CU        A   ACUUAA UGAACAGG  CCAAAACG C   |||||| ||||||||  ||||||||   UGAAUU ACUUGUCC  GGUUUUGC G CG      C        CU        U |
Stem-loop sequence | ACUUAAAUGAACAGGCUCCAAAACGACGUCGUUUUGGUCCCUGUUCACUUAAGUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA137654.1 |
|
0.0 | TSA: Vitis vinifera Locus_2778_Transcript_4/9_Confidence_0.062.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_019225919.1 |
|
0.0 | PREDICTED: Vitis vinifera uncharacterized LOC104882034 (LOC104882034), mRNA | NA | coding protein | psRNATarget | |||||||||
KA157133.1 |
|
2.0 | TSA: Vitis vinifera Locus_10143_Transcript_8/10_Confidence_0.393.Vivi mRNA sequence | NA | coding protein | psRNATarget |