ncRNA ID | lus-miR408a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AUGCACUGCCUCUUCCCUGGC - NA |
Stem-loop(if miRNA) |
         U      CCC    UAAGAA      C    AAA         -     C  A   A      AU  A C   CUU      A GAUCGAAAG GAAAAA   GAGG      GGAAGA GAGA   AAAGAGGCU GGGAA AG CAG GCAUGG  AG G UUA   ACAGAA C ||||||||| ||||||   ||||      |||||| ||||   ||||||||| ||||| || ||| ||||||  || | |||   |||||| CUGGUUUUU CUUUUU   CUCC      CCUUCU UUCU   UUUUUCCGG CCCUU UC GUC CGUACC  UC C AGU   UGUUUU C          U      ---    ----CA      C    CCC         U     C  C   A      CU  - C   -UU      C |
Stem-loop sequence | GAUCGAAAGUGAAAAACCCGAGGUAAGAAGGAAGACGAGAAAAAAAGAGGCUGGGAACAGACAGAGCAUGGAUAGAGCUUACUUACAGAAACCCUUUUGUUUUGACCCUUCCCAUGCACUGCCUCUUCCCUGGCCUUUUUCCCUCUUCUCUUCCACCCUCUUUUUCUUUUUUGGUC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |