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BaseInfo

ncRNA ID lus-miR408a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AUGCACUGCCUCUUCCCUGGC - NA
Stem-loop(if miRNA)          U      CCC    UAAGAA      C    AAA         -     C  A   A      AU  A C   CUU      A
GAUCGAAAG GAAAAA   GAGG      GGAAGA GAGA   AAAGAGGCU GGGAA AG CAG GCAUGG  AG G UUA   ACAGAA C
||||||||| ||||||   ||||      |||||| ||||   ||||||||| ||||| || ||| ||||||  || | |||   ||||||
CUGGUUUUU CUUUUU   CUCC      CCUUCU UUCU   UUUUUCCGG CCCUU UC GUC CGUACC  UC C AGU   UGUUUU C
         U      ---    ----CA      C    CCC         U     C  C   A      CU  - C   -UU      C
Stem-loop sequence GAUCGAAAGUGAAAAACCCGAGGUAAGAAGGAAGACGAGAAAAAAAGAGGCUGGGAACAGACAGAGCAUGGAUAGAGCUUACUUACAGAAACCCUUUUGUUUUGACCCUUCCCAUGCACUGCCUCUUCCCUGGCCUUUUUCCCUCUUCUCUUCCACCCUCUUUUUCUUUUUUGGUC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).